Publications (2018)

International Journal Articles 

  1. Cortijo S, Charoensawan V, Roudier F, Wigge PA. Chromatin Immunoprecipitation Sequencing (ChIP-Seq) for Transcription Factors and Chromatin Factors in Arabidopsis thaliana Roots: From Material Collection to Data Analysis. Methods Mol Biol. 2018;1761:231-248. doi: 10.1007/978-1-4939-7747-5_18. Jan 2018.
  2. Dickinson PJ, Kumar M, Martinho C, Yoo SJ, Lan H, Artavanis G, Charoensawan V, Schöttler MA, Bock R, Jaeger KE, Wigge PA. Chloroplast Signaling Gates Thermotolerance in Arabidopsis. Cell Rep. 2018 Feb 13;22(7):1657-1665. doi: 10.1016/j.celrep.2018.01.054. Feb 2018
  3. Lert-Itthiporn W, Suktitipat B, Grove H, Sakuntabhai A, Malasit P, Tangthawornchaikul N, Matsuda F, Suriyaphol P. Validation of genotype imputation in Southeast Asian populations and the effect of single nucleotide polymorphism annotation on imputation outcome. BMC Med Genet. 2018 Feb 13;19(1):23. doi: 10.1186/s12881-018-0534-8. PMID: 29439659. IF: 1.91
  4. Preedagasamzin S, Nualkaew T, Pongrujikorn T, Jinawath N., Kole R, Fucharoen S, Jearawiriyapaisarn N, Svasti S. Engineered U7 snRNA mediates sustained splicing correction in erythroid cells from β-thalassemia/HbE patients. Biochem Biophys Res Commun. Apr 2018.
  5. Traewachiwiphak S., Yokthongwattana C., Ves-Urai P., Charoensawan V., Yokthongwattana K., Gene expression and promoter characterization of heat-shock protein 90B gene (HSP90B) in the model unicellular green alga Chlamydomonas reinhardtii. Plant Science. Jul 2018:272:107-116. doi: 10.1016/j.plantsci.2018.04.010. Epub 17 Apr 2018.
  6. Preedagasamzin S, Nualkaew T, Pongrujikorn T, Jinawath N., Kole R, Fucharoen S, Jearawiriyapaisarn N, Svasti S., Engineered U7 snRNA mediates sustained splicing correction in erythroid cells from β-thalassemia/HbE patients. Biochem Biophys Res Commun. 2018 Apr 30;499(1):86-92. doi: 10.1016/j.bbrc.2018.03.102. Epub 2018 Mar 21.
  7. Shiao MS, Chiablaem K, Charoensawan V., Ngamphaiboon N, Jinawath N., Emergence of Intrahepatic Cholangiocarcinoma: How High-Throughput Technologies Expedite the Solutions for a Rare Cancer Type. Front Genet. 2018 Aug 15;9:309. doi: 10.3389/fgene.2018.00309. eCollection 2018.Review. Aug 2018.
  8. Saengwimol D, Rojanaporn D, Chaitankar V, Chittavanich P, Aroonroch R, Boontawon T, Thammachote W, Jinawath N., Hongeng S, Kaewkhaw R., A three-dimensional organoid model recapitulates tumorigenic aspects and drug responses of advanced human retinoblastoma. Sci Rep. 2018 Oct 23;8(1):15664. doi: 10.1038/s41598-018-34037-y. 2018. Oct 2018.

Invited Talks/Oral Presentation

  1. Charoensawan V, Epigenetic Landscapes of Nucleosome and Transcription Factors. TOAC 2018. Jan 2018.
  2. Charoensawan V, Systems Biology: working at the interface between biology and engineering. Invited lecture at Nakon Phanom University. 2018.
  3. Tanramluk D, Drug Design by Lock and Key. MB Science Fair. Jan 2018.
  4. Charoensawan V, Uncovering global patterns of gene expression regulation using Systems Biology. Invited talk at the workshop on Systems Biology for Innovative BioEconomy. Feb 2018.
  5. Jinawath N, Joint symposium between the Program in Translational Medicine, Ramathibodi. College of Science, National Sun Yat Sen University: Kaohsiung, Taiwan (Speaker). Feb 2018.
  6. Jinawath N, Asian Clinical Oncology Society 2018 (ACOS). (invited speaker) Chiang Mai, Bangkok, Thailand. Mar 2018.
  7. ICBS Colloquium, Zhu M. , A pharmacological chaperone approach for Parkinson’s and Alzheimer’s disease. Mar 2018.
  8. Tanramluk D., MANORAA for Structural Bioinformatics & Drug Discovery. National Institute for Child and Family Development. Mar 2018.
  9. Charoensawan V, ฉลาดคิด อย่างนักวิทยาศาสตร์ – IT & Computer Science. Invited speaker at Thailand Science Camp ครั้งที่ 10. Mar 2018
  10. Narupiyakul L., MU Tram : Real-time location tracking application for Mahidol University’s tram. THAILAND INNOVATION HUBS 4.0S. Apr 2018.
  11. Jinawath N., AMG215 advisory board meeting and one-day advanced course in colorectal cancer hosted by Amgen, Chiang Mai, Thailand (invited speaker). Apr 2018.
  12. Charoensawan V., Single-cell Genomics Conferences & Workshop 2018. Century park Hotel & Faculty of Science Mahidol University. May 2018.
  13. Jinawath N., Biomedical and technological sciences seminar hosted by Department of Biomedical Science, Faculty of Medicine, Prince of Songkla University, Hat Yai, Songkhla, Thailand (invited speaker). May 2018.
  14. Charoensawan V., Systems Biology Approach to Epigenetic Landscape of Nucleosome and Transcription Factors.Young Scientist Program, IUBMB 2018.Jun 2018.
  15. Charoensawan V., Epigenomic Landscape of Nucleosome and Transcription Factors: A Systems Biology Approach (across eukaryotic kingdoms). IUBMB congress (FAOBMB Young Scientist Award). June 2018.
  16. ICBS Colloquium, Pithukpakorn M., Cancer Precision Medicine. Jun 2018.
  17. Charoensawan V.Uncovering cellular heterogeneity using single-cell omics. Pharmaceutical Society Korea Congress, Jeju, Korea, Oct 2018.
  18. Charoensawan V.Less is more? Systems biology of gene expression regulation at single-cell resolution. The 30th Annual Meeting of Thai Society for Biotechnology and International Conference, Bangkok, Nov 2018.
  19. Charoensawan V.Advances and Challenges of Single-Cell Transcriptomics. Cancer Precision Medicine Academic Conference 2018, Bangkok, Nov 2018.

 

Proceeding/Poster Presentation at meetings

  1. Hu, C., Chan, T., Wen, Y., Tantidham, T., Sanghlao, S., Yimwadsana B., Mongkolwat, P., “IoT-based LED Lighting Control In Smart Home”, Proceedings of 4th IEEE International Conference on Applied System Innovation 2018, ICASI 2018, Chiba, Japan, pp. 877-880, Apr 2018.
  2. Ekpinitpittaya S, Suktitipat B., Horthongkham N, Suriyaphol S. Thai HIV Drug Resistance Database Web Application. Poster presentation: Recent Advances in Genomics and Genetics Conference 2018 (RAGG2018): Innovative Genomics and Genetics., The Ambassador Sukhumvit Hotel, Bangkok, Thailand. Jun 2018.
  3. Vimont N, Fouche M, Cortijo, Charoensawan V., Yvin Jc, Arkoun M, Dirlewanger E, Wigge Pa, Wenden B, Towards a better understanding of bud development in different sweet cherry, Abstract 9th International Rosaceae Genomics Conference in China, 26-30 Jun 2018
  4. Narupiyakul L., Sanghlao S., Yimwadsana B., “An Indoor Navigation System for the Visually Impaired Based on RSS Lateration and RF Fingerprint”, The Proceedings of the 16th International Conference on Smart Homes, Assistive Technology and Health Telematics, Singapore. 10-12 Jul 2018
  5. Yimwadsana B., Chanthapeth, P., Lertthanyaphan, C., Pornvechamnuay, A., “An IoT Controlled System for Plant Growth”, in Proceedings of the 2018 Seventh ICT International Student Project Conference (ICT-ISPC), Bangkok, Thailand, pp. 1-6, Jul 2018.
  6. Yimwadsana B., Boonsiri, P., Chaisri, P., Suvarnakas, K., “CIRRUS:Distributed Cloud Storage”, in Proceedings of the 2018 Seventh ICT International Student Project Conference (ICT-ISPC), Bangkok, pp. 1-6, Thailand, Jul 2018.
  7. Yimwadsana B., Artiwet, P., “On Optimizing DNA Sequence Design for DNA Logic AND Circuit”, Proceedings of the IEEE Region 10 Conference 2018, Jeju, South Korea, pp. 1828-1832. Oct 2018.
  8. Ruangroengkulrith S, Lee NK, Hemberg M, Charoensawan V., “Convolutional Neural Network As A Tool For High-Throughput Identification Of Regulatory Sequences In Genomic DNA”. The 44th Congress on Science and Technology of Thailand. Bangkok, Oct 2018.
  9. Srithiowat N., Tanramluk D., Multi-target drug design approaches to improve the affinity of Gleevec to p38-MAPK., Cancer Precision Medicine Academic Conference 2018, Bangkok, Thailand. Dec 2018.